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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907716.1_cds_XP_016457843.1_51528
CDS Infomation

[gene=LOC107781621] [db_xref=GeneID:107781621] [protein=protein NSP-INTERACTING KINASE 3-like] [protein_id=XP_016457843.1] [location=complement(join(39386..39700,40106..40500,41769..42110,43112..43258,43398..43495,43728..43787,44256..44399,44532..44603,44709..44841,44996..45095))] [gbkey=CDS]
Sequence

ATGTTGCATCTGCTTTGGAATGTGGGGCTGCTACTTATTTGTACATTGATGATGGAGAGT
TCTTCTGCTACACTTTCTCCTACTGGTATAAACTATGAAGTTGTTGCTTTGACGGAAATT
AAGAAGGCTTTACATGACCCCTATAATGTTCTGGACAATTGGGATGTGAATTCCGTAGAT
CCTTGCAGTTGGAGAATGGTTACTTGTTCATTTGATGGCTATGTTTCTGCTCTAGCACTA
CCTAGTCAAAGTCTATCGGGCACATTATCGCCTGGAATTGGCAATCTTACTAACTTGCAA
TCTGTATTGTTGCAAAACAATGCCATTTCCGGTCCTATACCTGATGTGATTGGGAAGTTA
CAGAAGCTTCAGACAATTGATCTCTCCAACAATAAATTTGAAGGCGAAATACCCACTTCT
TTTGGAGACCTCAAGAATTTGAATTATTTGGATGTCTCTTATAATAATCTAAGTGGTACC
CTTCCTAAAATATCAGCACGAGCTTTCAAAGTGCTTGGAAATCCTTTAATTTGTGGTCAA
AGTTCTGAGAACAATTGTTCGGCAGTCTATCCAGAACCACTGTCCTTCCCACCAGATAGT
CTGACAGATCAACCAGGTGCTGCTCGCAAGAGCCGTCGCGTGGTTGTTGCATTTGTTGCA
AGTTTTGGTGCTGCTTTTTTGGTCAGTGTAGCAGTGGCTTTTGTTCTTTGGTGGCACTAC
AGACATAATCGGCAGATCTTCTTTGATGTCAACGAGCAATGTTATCCAGAGGTATGCTTG
GGTCACCTGAAAAGGTACACCTTTAAGGAACTGTGGAATGCAACTGACCGATTCAGCTCA
AAGCATATTTTGGGTAGGGGAGGATTCGGGATTGTGTATAAAGCCTGCTTAAACAATGGA
ACTGTTGTGGCTGTCAAAAGATTGAAGGACTACAATGCTGTTGGTGGTGAAAACCAATTT
CAGACAGAAGTAGAGTTGATTAGTTTGGCTGTCCATCGGAATCTTCTCCGTCTTCTGGGG
TTTTGTTCAACTGAAAATGAACGGCTTCTTGTTTACCCTTATATGCCAAACGGGAGTGTA
GCATCACGATTAAAAGATAATGTGTATGGTAGACTAGTTTTAGACTGGTCAAGGCGGAAA
ACGATAGCACAAGGTACAGCACGAGGGCTAGTTTACTTGCATGAGCAGTGTGATCCCAAA
ATTATCCATCGTGATGTCAAAGCAGCCAACATTTTGTTGGATGAGGAATTTGAGGCAGTA
GTTGGTGATTTTGGGTTGGCAAAGCTCTTGGATCACCGGGATTCTCATGTGACAACTGCT
GTTAGGGGCACCATTGGCCACATTGCTCCGGAATATTTGTCAACTGGCCAATCTTCTGAA
AAAACTGACGTTTTTGGGTTTGGAATCTTGCTGCTTGAGCTGATTACAGGCCAGAAAGCC
ATGGACTTTGGTCGAGGGGCCAACCAGAAAGGTGTTGTTATGCTTGATTGGGTGAAAGAG
CTCCATCAAGAGGGGAAATCGAACCTTATGGTGGATAAAGATCTGAAAAATAACTTTGAC
CGGATTGAACTGGAAGAGATGGTTAAAGTTGCCCTACTATGTACCCAGTTCAACCCTTCT
CATCGGCCAAAAATGTCCGAAGCATTAAGGATGTTAGAAGGGGATGGTTTGGCTGAAAAA
TGGGAGGCATCACAAAAACTTGAGGCACCAAGAAACCGCGCTTTTGAACATACTCCACAA
AGATATTCCAACTACGTTGAAGAATCGTCACTAGTTGAACCAATGGAACTTTCTGGACCT
AGATGA

Peptide Sequence

PEP ID

XP_016457843.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 3-like [Nicotiana tabacum]
Sequence

MLHLLWNVGLLLICTLMMESSSATLSPTGINYEVVALTEIKKALHDPYNVLDNWDVNSVD
PCSWRMVTCSFDGYVSALALPSQSLSGTLSPGIGNLTNLQSVLLQNNAISGPIPDVIGKL
QKLQTIDLSNNKFEGEIPTSFGDLKNLNYLDVSYNNLSGTLPKISARAFKVLGNPLICGQ
SSENNCSAVYPEPLSFPPDSLTDQPGAARKSRRVVVAFVASFGAAFLVSVAVAFVLWWHY
RHNRQIFFDVNEQCYPEVCLGHLKRYTFKELWNATDRFSSKHILGRGGFGIVYKACLNNG
TVVAVKRLKDYNAVGGENQFQTEVELISLAVHRNLLRLLGFCSTENERLLVYPYMPNGSV
ASRLKDNVYGRLVLDWSRRKTIAQGTARGLVYLHEQCDPKIIHRDVKAANILLDEEFEAV
VGDFGLAKLLDHRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKA
MDFGRGANQKGVVMLDWVKELHQEGKSNLMVDKDLKNNFDRIELEEMVKVALLCTQFNPS
HRPKMSEALRMLEGDGLAEKWEASQKLEAPRNRAFEHTPQRYSNYVEESSLVEPMELSGP
R

Transcript Sequence

Gene sequence data has not been registered.